Single-cell software Archives - BioTuring's Blog
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Tag Archives: Single-cell software

Comparing UMAP vs t-SNE in Single-cell RNA-Seq Data Visualization, Simply Explained
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umap vs tsne global structure

How to Make Sense of Single-cell RNA Sequencing Data? Less is More Thanks to single-cell RNA sequencing (scRNA-seq), researchers are blessed with a trove of information. Yet, this blessing is also a curse in data visualization and further analysis! Since each cell is described by its gene expression profile, our […]

A review of Haining Lab’s work: Loss of ADAR1 in tumors overcomes resistance to immune checkpoint blockade
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Ever questioned why the immune system does not attack our own double-stranded RNA? Speaking of this, we should not ignore the role of ADAR, the gene that encodes Double-stranded RNA-specific adenosine deaminase enzyme, responsible for converting adenosines to inosines (A -> I editing) in double-stranded RNA (dsRNA) substrates. ADAR was […]

BioTuring Browser: the software to resolve major challenges in single-cell RNA-seq data analysis
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Single-cell RNA-seq technologies have opened up a completely new era for transcriptomic studies. For the first time ever, scientists can look at individual transcriptomic profiles of millions of cells, and better understand how each cell functions in a tissue. Yet science is confronting bigger challenges analyzing these massive amounts of […]